Stem-loop abu-mir-728a

Accession

MI0033943

Description

Astatotilapia burtoni abu-mir-728a precursor miRNA

Sequence

aaauguaguagacuauaaguauacaugaaacucagaaaguAUACUAAGUAUACUACGUUUAC
((((((((((.(((...(((((((..............))))))).))).))))))))))..

Structure

--          g   aua       augaaa 
  aaauguagua acu   aguauac      c
  |||||||||| |||   |||||||       
  UUUGCAUCAU UGA   UCAUAug      u
CA          A   --A       aaagac 

Annotation confidence Not enough data

Genome context

JH425974.1: 235092-235153 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-728a

Mature abu-miR-728a

• Accession: MIMAT0042206
• Description: Astatotilapia burtoni abu-miR-728a mature miRNA
• Sequence: 41 - AUACUAAGUAUACUACGUUUAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381