Stem-loop abu-mir-1788

Accession

MI0033942

Description

Astatotilapia burtoni abu-mir-1788 precursor miRNA

Sequence

GGCUUGUUUUAAGUUGCCUGUGaauuuuaucuguuacacaggcagcuaaagcaagccuuga
(((((((((((.(((((((((((((.......))).)))))))))))))))))))))....

Structure

----           A          -   uu 
    GGCUUGUUUUA GUUGCCUGUG aau  u
    ||||||||||| |||||||||| |||  a
    ccgaacgaaau cgacggacac uug  u
aguu           -          a   uc 

Annotation confidence Not enough data

Genome context

JH425396.1: 980923-980983 [-]

Mature abu-miR-1788

• Accession: MIMAT0042205
• Description: Astatotilapia burtoni abu-miR-1788 mature miRNA
• Sequence: 1 - GGCUUGUUUUAAGUUGCCUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381