Stem-loop abu-mir-2187b

Accession

MI0033938

Description

Astatotilapia burtoni abu-mir-2187b precursor miRNA

Sequence

UUUAAUUAGUACAGCCUGUAUUaguaaugucaucuauucuUUACAGGCUAUGCUAAUCUAUGc
....(((((((.((((((((..((.((((.....)))))).)))))))).)))))))......

Structure

--UUUA       C        UU  u    u 
      AUUAGUA AGCCUGUA  ag aaug c
      ||||||| ||||||||  || |||| a
      UAAUCGU UCGGACAU  uc uuau u
cGUAUC       A        -U  -    c 

Annotation confidence Not enough data

Genome context

JH425695.1: 533936-533998 [+]

Mature abu-miR-2187b-5p

• Accession: MIMAT0042200
• Description: Astatotilapia burtoni abu-miR-2187b-5p mature miRNA
• Sequence: 1 - UUUAAUUAGUACAGCCUGUAUU - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-2187b-3p

• Accession: MIMAT0042201
• Description: Astatotilapia burtoni abu-miR-2187b-3p mature miRNA
• Sequence: 41 - UUACAGGCUAUGCUAAUCUAUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381