Stem-loop abu-mir-196b

Accession

MI0033932

Description

Astatotilapia burtoni abu-mir-196b precursor miRNA

Sequence

UAGGUAGUCUCAUGUUGUUGGGCuauauuauuucucccacaacacaaaacugccuuga
.(((((((....((((((.(((.............)))))))))....)))))))...

Structure

--U       CUCA      U   Cuaua 
   AGGUAGU    UGUUGU GGG     u
   |||||||    |||||| |||     u
   uccguca    acaaca ccc     a
agu       aaac      -   ucuuu 

Annotation confidence Not enough data

Genome context

JH425496.1: 531187-531244 [+]

Mature abu-miR-196b

• Accession: MIMAT0042193
• Description: Astatotilapia burtoni abu-miR-196b mature miRNA
• Sequence: 1 - UAGGUAGUCUCAUGUUGUUGGGC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381