Stem-loop abu-let-7f

Accession

MI0033927

Description

Astatotilapia burtoni abu-let-7f precursor miRNA

Sequence

UGAGGUAGUAGAUUGUGUAGUUuuaggguagugauuuugcccucuuuaggagauaacuauacaaucuauugccuuccc
.(((((((((((((((((((((..(((((((.....)))))))...........)))))))))))))))))))))...

Structure

--U                     ---------uu       u 
   GAGGUAGUAGAUUGUGUAGUU           aggguag g
   |||||||||||||||||||||           ||||||| a
   uuccguuaucuaacauaucaa           ucccguu u
ccc                     uagaggauuuc       u 

Annotation confidence Not enough data

Genome context

JH425848.1: 317361-317438 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-let-7f

Mature abu-let-7f

• Accession: MIMAT0042189
• Description: Astatotilapia burtoni abu-let-7f mature miRNA
• Sequence: 1 - UGAGGUAGUAGAUUGUGUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381