Stem-loop abu-mir-29a-1

Accession

MI0033914

Description

Astatotilapia burtoni abu-mir-29a-1 precursor miRNA

Sequence

accguuuuccucugguguucagaguuuccaucaugucUAGCACCAUUUGAAAUCGGUUA
((((.((((...(((((((.(((............))))))))))...)))).))))..

Structure

--    u    cuc       c   guuuc 
  accg uuuc   ugguguu aga     c
  |||| ||||   ||||||| |||      
  UGGC AAAG   ACCACGA Ucu     a
AU    U    UUU       -   guacu 

Annotation confidence Not enough data

Genome context

JH425342.1: 2343503-2343561 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-29a-1

Mature abu-miR-29a

• Accession: MIMAT0042165
• Description: Astatotilapia burtoni abu-miR-29a mature miRNA
• Sequence: 38 - UAGCACCAUUUGAAAUCGGUUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381