Stem-loop abu-mir-19a-2

Accession

MI0033908

Description

Astatotilapia burtoni abu-mir-19a-2 precursor miRNA

Sequence

uaguuuugcauaguugcacuacaagaauauaugaguUGUGCAAAUCUAUGCAAAACUG
(((((((((((((((((((.((............)).))))))..)))))))))))))

Structure

             --      u  aagaa 
uaguuuugcauag  uugcac ac     u
|||||||||||||  |||||| ||      
GUCAAAACGUAUC  AACGUG ug     a
             UA      U  aguau 

Annotation confidence Not enough data

Genome context

JH425469.1: 935992-936049 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from abu-mir-19a-2

Mature abu-miR-19a

• Accession: MIMAT0042129
• Description: Astatotilapia burtoni abu-miR-19a mature miRNA
• Sequence: 37 - UGUGCAAAUCUAUGCAAAACUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381