Stem-loop abu-mir-218a-1

Accession

MI0033889

Description

Astatotilapia burtoni abu-mir-218a-1 precursor miRNA

Sequence

UUGUGCUUGAUCUAACCAUGUGgcugccagguuccuaucguggaacaugguucuuucaagcacc
..((((((((...((((((((..((((..(((....))))))).))))))))...)))))))).

Structure

UU        UCU        Gg    ca   u 
  GUGCUUGA   AACCAUGU  cugc  ggu c
  ||||||||   ||||||||  ||||  |||  
  cacgaacu   uugguaca  ggug  cua c
-c        uuc        -a    --   u 

Annotation confidence Not enough data

Genome context

JH425416.1: 1254753-1254816 [+]

Mature abu-miR-218a

• Accession: MIMAT0042101
• Description: Astatotilapia burtoni abu-miR-218a mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381