Stem-loop abu-mir-190a-1

Accession

MI0033859

Description

Astatotilapia burtoni abu-mir-190a-1 precursor miRNA

Sequence

UGAUAUGUUUGAUAUAUUAGGUUGuuauucagucccaACUAUAUAUCAAACAUAUUCCU
.((((((((((((((((..(((((...........)))))))))))))))))))))...

Structure

--U                UA     uuau 
   GAUAUGUUUGAUAUAU  GGUUG    u
   ||||||||||||||||  |||||    c
   UUAUACAAACUAUAUA  UCAac    a
UCC                --     ccug 

Annotation confidence Not enough data

Genome context

JH425494.1: 409174-409232 [-]

Mature abu-miR-190a-5p

• Accession: MIMAT0042144
• Description: Astatotilapia burtoni abu-miR-190a-5p mature miRNA
• Sequence: 1 - UGAUAUGUUUGAUAUAUUAGGUUG - 24
• Evidence: experimental ; Illumina [1]

Mature abu-miR-190a-3p

• Accession: MIMAT0042145
• Description: Astatotilapia burtoni abu-miR-190a-3p mature miRNA
• Sequence: 38 - ACUAUAUAUCAAACAUAUUCCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381