Stem-loop abu-mir-138-1

Accession

MI0033844

Description

Astatotilapia burtoni abu-mir-138-1 precursor miRNA

Sequence

AGCUGGUGUUGUGAAUCAGGCCGaugacacacaccucuuauaacccggcuauuucacaacaccagggu
..(((((((((((((...(((((......................)))))..)))))))))))))...

Structure

-AG             UCA     augacacaca 
   CUGGUGUUGUGAA   GGCCG          c
   |||||||||||||   |||||           
   gaccacaacacuu   ucggc          c
ugg             -ua     ccaauauucu 

Annotation confidence Not enough data

Genome context

JH425513.1: 991504-991571 [-]

Mature abu-miR-138

• Accession: MIMAT0042133
• Description: Astatotilapia burtoni abu-miR-138 mature miRNA
• Sequence: 1 - AGCUGGUGUUGUGAAUCAGGCCG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381