Stem-loop abu-mir-130-1

Accession

MI0033833

Description

Astatotilapia burtoni abu-mir-130-1 precursor miRNA

Sequence

gcccuuuuucuguugcacuacuggacacugagaugagCAGUGCAAUAUUAAAAGGGCA
((((((((..(((((((((.((.............)).)))))))))..)))))))).

Structure

-        uc         a  ggaca 
 gcccuuuu  uguugcacu cu     c
 ||||||||  ||||||||| ||     u
 CGGGAAAA  AUAACGUGA ga     g
A        UU         C  guaga 

Annotation confidence Not enough data

Genome context

JH425495.1: 27044-27101 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-130-1

Mature abu-miR-130

• Accession: MIMAT0042123
• Description: Astatotilapia burtoni abu-miR-130 mature miRNA
• Sequence: 38 - CAGUGCAAUAUUAAAAGGGCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381