Stem-loop abu-mir-218a-2

Accession

MI0033803

Description

Astatotilapia burtoni abu-mir-218a-2 precursor miRNA

Sequence

UUGUGCUUGAUCUAACCAUGUGgccccgccuacuguaacaucacaugguuccgucaagcgcca
..(((((((((..((((((((((....((.....))....))))))))))..)))))))))..

Structure

UU         CU          cccc  c 
  GUGCUUGAU  AACCAUGUGg    gc u
  |||||||||  ||||||||||    || a
  cgcgaacug  uugguacacu    ug c
ac         cc          acaa  u 

Annotation confidence Not enough data

Genome context

JH425351.1: 2948234-2948296 [+]

Mature abu-miR-218a

• Accession: MIMAT0042101
• Description: Astatotilapia burtoni abu-miR-218a mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381