Stem-loop abu-mir-462

Accession

MI0033759

Description

Astatotilapia burtoni abu-mir-462 precursor miRNA

Sequence

UAACGGAACCCAUAAUGCAGCUGugauucugagccccagcugguuaugggguccguuucc
.((((((.((((((((.((((((.(..........))))))))))))))).))))))...

Structure

--U      A        G      u auuc 
   AACGGA CCCAUAAU CAGCUG g    u
   |||||| |||||||| |||||| |     
   uugccu ggguauug gucgac c    g
ccu      g        -      - ccga 

Annotation confidence Not enough data

Genome context

JH425555.1: 856264-856323 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-462

Mature abu-miR-462

• Accession: MIMAT0042064
• Description: Astatotilapia burtoni abu-miR-462 mature miRNA
• Sequence: 1 - UAACGGAACCCAUAAUGCAGCUG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381