Stem-loop abu-mir-9-3

Accession

MI0033729

Description

Astatotilapia burtoni abu-mir-9-3 precursor miRNA

Sequence

UCUUUGGUUAUCUAGCUGUAUGagugacguacauucuucaUAAAGCUAGAUAACCGAAAGUA
..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))....

Structure

--UC               G      u  cg 
    UUUGGUUAUCUAGCU UAUGag ga  u
    ||||||||||||||| |||||| ||  a
    AAGCCAAUAGAUCGA AUacuu cu  c
AUGA               A      -  ua 

Annotation confidence Not enough data

Genome context

JH425409.1: 212858-212919 [-]

Mature abu-miR-9-5p

• Accession: MIMAT0042045
• Description: Astatotilapia burtoni abu-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-9-3p

• Accession: MIMAT0042049
• Description: Astatotilapia burtoni abu-miR-9-3p mature miRNA
• Sequence: 41 - UAAAGCUAGAUAACCGAAAGUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381