Stem-loop sfr-mir-10513

Accession

MI0033658

Description

Spodoptera frugiperda sfr-mir-10513 precursor miRNA

Sequence

guUAAGGCUGAGUACUACAUCUAauuuuaucgacaaaagucgggggucgaaggagucgaauccccucccccuaaaaauuauggcuauuuuaauauuuucaauuagggguuuaacccccauauuauuuuuuuugucgauaaaaUUAGAUGUAGUACUCGGCCUuaac
(((((((((((((((((((((((((((((((((((((((..((((((.((((((......)))....((((((((((.(((..........))).)))...)))))))))).)))))).........)))))))))))))))))))))))))))))))))))))))

Structure

                                       -------uc      c   ggagucgaauccccuc       ---   u   ggcu 
guUAAGGCUGAGUACUACAUCUAauuuuaucgacaaaag         gggggu gaa                ccccuaa   aaa uau    a
|||||||||||||||||||||||||||||||||||||||         |||||| |||                |||||||   ||| |||     
caauUCCGGCUCAUGAUGUAGAUUaaaauagcuguuuuu         ccccca uuu                ggggauu   uuu aua    u
                                       uuuauuaua      a   ----------------       aac   u   auuu 

Annotation confidence Not enough data

Genome context

JQCY02005313.1: 9511-9676 [-]

Mature sfr-miR-10513-5p

• Accession: MIMAT0041978
• Description: Spodoptera frugiperda sfr-miR-10513-5p mature miRNA
• Sequence: 3 - UAAGGCUGAGUACUACAUCUA - 23
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10513-3p

• Accession: MIMAT0041979
• Description: Spodoptera frugiperda sfr-miR-10513-3p mature miRNA
• Sequence: 143 - UUAGAUGUAGUACUCGGCCU - 162
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988