Stem-loop sfr-mir-10512

Accession

MI0033657

Description

Spodoptera frugiperda sfr-mir-10512 precursor miRNA

Sequence

gCACGGAUUAUUGACAUGGCcuuggugaguacaaggacuguagucuucauaauaaggggugagcuuauugcgaaauaccagcuAUAAUUCCGGAUUUGUGCUC
(((((((((...((((((((((((.......))))).)))).)))..........(((((.((((((((....))))..))))...))))).)))))))))..

Structure

--         --------------------------------------------AUU   -    -     gu 
  gCACGGAUU                                               GAC AUGG Ccuug  g
  |||||||||                                               ||| |||| |||||  a
  CGUGUUUAG                                               cug uguc ggaac  g
CU         GCCUUAAUAucgaccauaaagcguuauucgaguggggaauaauacuu   a    a     au 

Annotation confidence Not enough data

Genome context

JQCY02000371.1: 93249-93351 [+]

Mature sfr-miR-10512-5p

• Accession: MIMAT0041976
• Description: Spodoptera frugiperda sfr-miR-10512-5p mature miRNA
• Sequence: 2 - CACGGAUUAUUGACAUGGC - 20
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10512-3p

• Accession: MIMAT0041977
• Description: Spodoptera frugiperda sfr-miR-10512-3p mature miRNA
• Sequence: 84 - AUAAUUCCGGAUUUGUGCUC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988