Stem-loop sfr-mir-279b

Accession

MI0033652

Description

Spodoptera frugiperda sfr-mir-279b precursor miRNA

Literature search

1 open access papers mention sfr-mir-279b
(1 sentences)

Sequence

agcagccuccacggaaGAUAAGCGAUAUUCUAGUAUCaaguuguuuacguaucuUGACUAGAUUAUCACUUAUCCUcugaggucgcu
(((.(((((...(((.((((((.((((.(((((..(((((............)))))))))).)))).)))))).)))))))).)))

Structure

   a     cac   a      C    U     UA     uuguu 
agc gccuc   gga GAUAAG GAUA UCUAG  UCaag     u
||| |||||   ||| |||||| |||| |||||  |||||      
ucg uggag   ucU CUAUUC CUAU AGAUC  AGUuc     a
   c     ---   C      A    U     --     uaugc 

Annotation confidence Not enough data

Genome context

JQCY02000179.1: 50062-50148 [+]

Mature sfr-miR-279b-5p

• Accession: MIMAT0041967
• Description: Spodoptera frugiperda sfr-miR-279b-5p mature miRNA
• Sequence: 17 - GAUAAGCGAUAUUCUAGUAUC - 37
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-279b-3p

• Accession: MIMAT0041968
• Description: Spodoptera frugiperda sfr-miR-279b-3p mature miRNA
• Sequence: 55 - UGACUAGAUUAUCACUUAUCCU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988