miRBase entry: sfr-mir-279b

Stem-loop sfr-mir-279b


Accession
MI0033652
Description
Spodoptera frugiperda sfr-mir-279b precursor miRNA

Literature search
1 open access papers mention sfr-mir-279b
(1 sentences)

Sequence

agcagccuccacggaaGAUAAGCGAUAUUCUAGUAUCaaguuguuuacguaucuUGACUAGAUUAUCACUUAUCCUcugaggucgcu
(((.(((((...(((.((((((.((((.(((((..(((((............)))))))))).)))).)))))).)))))))).)))

Structure
   a     cac   a      C    U     UA     uuguu 
agc gccuc   gga GAUAAG GAUA UCUAG  UCaag     u
||| |||||   ||| |||||| |||| |||||  |||||      
ucg uggag   ucU CUAUUC CUAU AGAUC  AGUuc     a
   c     ---   C      A    U     --     uaugc 


Annotation confidence Not enough data
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Genome context
JQCY02000179.1: 50062-50148 [+]

Database links

Mature sfr-miR-279b-5p

Accession MIMAT0041967
Description Spodoptera frugiperda sfr-miR-279b-5p mature miRNA
Sequence 17 - GAUAAGCGAUAUUCUAGUAUC - 37
Evidence experimental
Illumina [1]

Mature sfr-miR-279b-3p

Accession MIMAT0041968
Description Spodoptera frugiperda sfr-miR-279b-3p mature miRNA
Sequence 55 - UGACUAGAUUAUCACUUAUCCU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988