miRBase entry: sfr-mir-285

Stem-loop sfr-mir-285


Accession
MI0033651
Description
Spodoptera frugiperda sfr-mir-285 precursor miRNA


Sequence

guccacaauuugacaACUGUAUUCGAGUGAGUGGAUAgaguugugauucucUAGCACCAUUCGAAUUCAGUGCucgaauuuggac
(((((.(((((((..((((.(((((((((.(((..(((((........))))).)))))))))))).))))..))))))))))))

Structure
     c       ca    U         A   GA     uug 
gucca aauuuga  ACUG AUUCGAGUG GUG  UAgag   u
||||| |||||||  |||| ||||||||| |||  |||||    
caggu uuaagcu  UGAC UAAGCUUAC CAC  AUcuc   g
     -       CG    U         -   -G     uua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JQCY02001518.1: 98591-98675 [+]

Database links

Mature sfr-miR-285-5p

Accession MIMAT0041965
Description Spodoptera frugiperda sfr-miR-285-5p mature miRNA
Sequence 16 - ACUGUAUUCGAGUGAGUGGAUA - 37
Evidence experimental
Illumina [1]

Mature sfr-miR-285-3p

Accession MIMAT0041966
Description Spodoptera frugiperda sfr-miR-285-3p mature miRNA
Sequence 52 - UAGCACCAUUCGAAUUCAGUGC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988