Stem-loop sfr-mir-10509

Accession

MI0033649

Description

Spodoptera frugiperda sfr-mir-10509 precursor miRNA

Sequence

ucaccccguuuuacUGUGUCACGUACAGUAAAAUGUUuuacuuugucacguacaguaagCCCCAUUUUACUGUACGUGACAcaguaaaacgggguga
(((((((((((((((((((((((((((((((((((.((((((...........))))))...)))))))))))))))))))))))))))))))))))

Structure

                                   --U      uugu 
ucaccccguuuuacUGUGUCACGUACAGUAAAAUG   Uuuacu    c
|||||||||||||||||||||||||||||||||||   ||||||    a
aguggggcaaaaugacACAGUGCAUGUCAUUUUAC   gaauga    c
                                   CCC      caug 

Annotation confidence Low

Genome context

JQCY02016562.1: 1009-1105 [+]

Mature sfr-miR-10509-5p

• Accession: MIMAT0041961
• Description: Spodoptera frugiperda sfr-miR-10509-5p mature miRNA
• Sequence: 15 - UGUGUCACGUACAGUAAAAUGUU - 37
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10509-3p

• Accession: MIMAT0041962
• Description: Spodoptera frugiperda sfr-miR-10509-3p mature miRNA
• Sequence: 60 - CCCCAUUUUACUGUACGUGACA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988