Stem-loop sfr-mir-10506

Accession

MI0033643

Description

Spodoptera frugiperda sfr-mir-10506 precursor miRNA

Sequence

gcgucuuuucCUGUUUCAGAUCUACAUCUGGCaauggagaacccaUUGGACGAUGUAGUUGUGAAACaggaaaaaacgc
((((.(((((((((((((.(.(((((((...((((((.....))))))...))))))).).))))))))))))).))))

Structure

    c             G U       UGG      a 
gcgu uuuucCUGUUUCA A CUACAUC   Caaugg g
|||| ||||||||||||| | |||||||   |||||| a
cgca aaaaggaCAAAGU U GAUGUAG   GUUacc a
    a             G U       CAG      c 

Annotation confidence Not enough data

Genome context

JQCY02003193.1: 4033-4111 [+]

Mature sfr-miR-10506-5p

• Accession: MIMAT0041952
• Description: Spodoptera frugiperda sfr-miR-10506-5p mature miRNA
• Sequence: 11 - CUGUUUCAGAUCUACAUCUGGC - 32
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10506-3p

• Accession: MIMAT0041953
• Description: Spodoptera frugiperda sfr-miR-10506-3p mature miRNA
• Sequence: 46 - UUGGACGAUGUAGUUGUGAAAC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988