Stem-loop sfr-mir-10500

Accession

MI0033634

Description

Spodoptera frugiperda sfr-mir-10500 precursor miRNA

Sequence

gUGUUCGGGCAUGUAUUCGUCguagguucaagagugaacgucauagagAUAAGGAAGUGUGUUCGGGCau
(((((((((((((..((((((.((.(((((....))))).)....).)))...))).)))))))))))))

Structure

             UA   ---   g ---- g     a 
gUGUUCGGGCAUG  UUC   GUC u    a guuca g
|||||||||||||  |||   ||| |    | |||||  
uaCGGGCUUGUGU  AAG   UAg g    u caagu a
             -G   GAA   a auac g     g 

Annotation confidence Not enough data

Genome context

JQCY02002980.1: 16524-16593 [+]

Mature sfr-miR-10500-5p

• Accession: MIMAT0041936
• Description: Spodoptera frugiperda sfr-miR-10500-5p mature miRNA
• Sequence: 2 - UGUUCGGGCAUGUAUUCGUC - 21
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10500-3p

• Accession: MIMAT0041937
• Description: Spodoptera frugiperda sfr-miR-10500-3p mature miRNA
• Sequence: 49 - AUAAGGAAGUGUGUUCGGGC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988