miRBase entry: sfr-mir-10499a-4

Stem-loop sfr-mir-10499a-4

Accession

MI0033632

Description

Spodoptera frugiperda sfr-mir-10499a-4 precursor miRNA

Sequence

ugcaugggguagcaCAAGGGUUUAAAACUCCAUACAuguguauuugugCAUGGAGUUUCAAACUCUUGGAuugcucuaugca
((((((((((((..(((((((((.(((((((((.((((......)))).))))))))).)))))))))..))))))))))))

Structure

            ca         A         A    ug 
ugcaugggguag  CAAGGGUUU AAACUCCAU CAug  u
||||||||||||  ||||||||| ||||||||| ||||   
acguaucucguu  GUUCUCAAA UUUGAGGUA gugu  a
            AG         C         C    uu

Annotation confidence Not enough data

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Genome context

JQCY02003683.1: 100030-100111 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from sfr-mir-10499a-4

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-10499a-3p

Accession	MIMAT0041932
Description	Spodoptera frugiperda sfr-miR-10499a-3p mature miRNA
Sequence	49 - CAUGGAGUUUCAAACUCUUGGA - 70
Evidence	experimental Illumina [1]

Mature sfr-miR-10499a-4-5p

Accession	MIMAT0041935
Description	Spodoptera frugiperda sfr-miR-10499a-4-5p mature miRNA
Sequence	15 - CAAGGGUUUAAAACUCCAUACA - 36
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988