miRBase entry: sfr-mir-10499a-3

Stem-loop sfr-mir-10499a-3


Accession
MI0033631
Description
Spodoptera frugiperda sfr-mir-10499a-3 precursor miRNA


Sequence

gcauggggcagugCAAGGGUUUAAAACUCCAUACaugugcauggaaucugCAUGGAGUUUCAAACUCUUGGAuugcucugugu
((((((((((((.(((((((((.(((((((((.((.((.......)).)).))))))))).))))))))).))))))))))))

Structure
            g         A         A  u  gc 
gcauggggcagu CAAGGGUUU AAACUCCAU Ca gu  a
|||||||||||| ||||||||| ||||||||| || ||  u
ugugucucguuA GUUCUCAAA UUUGAGGUA gu ua  g
            G         C         C  c  ag 


Annotation confidence Not enough data
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Genome context
JQCY02014572.1: 491-573 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-10499a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-10499a-5p

Accession MIMAT0041931
Description Spodoptera frugiperda sfr-miR-10499a-5p mature miRNA
Sequence 14 - CAAGGGUUUAAAACUCCAUAC - 34
Evidence experimental
Illumina [1]

Mature sfr-miR-10499a-3p

Accession MIMAT0041932
Description Spodoptera frugiperda sfr-miR-10499a-3p mature miRNA
Sequence 51 - CAUGGAGUUUCAAACUCUUGGA - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988