miRBase entry: sfr-mir-10499a-3

Stem-loop sfr-mir-10499a-3

Accession

MI0033631

Description

Spodoptera frugiperda sfr-mir-10499a-3 precursor miRNA

Sequence

gcauggggcagugCAAGGGUUUAAAACUCCAUACaugugcauggaaucugCAUGGAGUUUCAAACUCUUGGAuugcucugugu
((((((((((((.(((((((((.(((((((((.((.((.......)).)).))))))))).))))))))).))))))))))))

Structure

            g         A         A  u  gc 
gcauggggcagu CAAGGGUUU AAACUCCAU Ca gu  a
|||||||||||| ||||||||| ||||||||| || ||  u
ugugucucguuA GUUCUCAAA UUUGAGGUA gu ua  g
            G         C         C  c  ag

Annotation confidence Not enough data

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Genome context

JQCY02014572.1: 491-573 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-10499a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-10499a-5p

Accession	MIMAT0041931
Description	Spodoptera frugiperda sfr-miR-10499a-5p mature miRNA
Sequence	14 - CAAGGGUUUAAAACUCCAUAC - 34
Evidence	experimental Illumina [1]

Mature sfr-miR-10499a-3p

Accession	MIMAT0041932
Description	Spodoptera frugiperda sfr-miR-10499a-3p mature miRNA
Sequence	51 - CAUGGAGUUUCAAACUCUUGGA - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988