miRBase entry: sfr-mir-10499a-2

Stem-loop sfr-mir-10499a-2


Accession
MI0033630
Description
Spodoptera frugiperda sfr-mir-10499a-2 precursor miRNA


Sequence

gcauggggcagugCAAGGGUUUAAAACUCCAUACauguguagagucugCAUGGAGUUUCAAACUCUUGGAuugcucugugc
((((((((((((.(((((((((.((((((((......(((((...))))))))))))).))))))))).))))))))))))

Structure
            g         A        UACaug     a 
gcauggggcagu CAAGGGUUU AAACUCCA      uguag  
|||||||||||| ||||||||| ||||||||      ||||| g
cgugucucguuA GUUCUCAAA UUUGAGGU      ACguc  
            G         C        ------     u 


Annotation confidence Not enough data
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Genome context
JQCY02014572.1: 230-310 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-10499a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-10499a-5p

Accession MIMAT0041931
Description Spodoptera frugiperda sfr-miR-10499a-5p mature miRNA
Sequence 14 - CAAGGGUUUAAAACUCCAUAC - 34
Evidence experimental
Illumina [1]

Mature sfr-miR-10499a-3p

Accession MIMAT0041932
Description Spodoptera frugiperda sfr-miR-10499a-3p mature miRNA
Sequence 49 - CAUGGAGUUUCAAACUCUUGGA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988