Stem-loop sfr-mir-10499a-1

Accession

MI0033628

Description

Spodoptera frugiperda sfr-mir-10499a-1 precursor miRNA

Sequence

gcaugggacaguaCAAGGGUUUAAAACUCCAUACauguauggaaucugCAUGGAGUUUCAAACUCUUGGAuugcucuaugc
(((((((.((((.(((((((((.(((((((((.((.(........))).))))))))).))))))))).)))).)))))))

Structure

       a    a         A         A  u uau 
gcauggg cagu CAAGGGUUU AAACUCCAU Ca g   g
||||||| |||| ||||||||| ||||||||| || |    
cguaucu guuA GUUCUCAAA UUUGAGGUA gu c   g
       c    G         C         C  - uaa 

Annotation confidence Not enough data

Genome context

JQCY02003683.1: 100830-100910 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from sfr-mir-10499a-1

Mature sfr-miR-10499a-5p

• Accession: MIMAT0041931
• Description: Spodoptera frugiperda sfr-miR-10499a-5p mature miRNA
• Sequence: 14 - CAAGGGUUUAAAACUCCAUAC - 34
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10499a-3p

• Accession: MIMAT0041932
• Description: Spodoptera frugiperda sfr-miR-10499a-3p mature miRNA
• Sequence: 49 - CAUGGAGUUUCAAACUCUUGGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988