miRBase entry: sfr-mir-10494

Stem-loop sfr-mir-10494

Accession

MI0033620

Description

Spodoptera frugiperda sfr-mir-10494 precursor miRNA

Literature search

1 open access papers mention sfr-mir-10494
(1 sentences)

Sequence

auaggcgUGAACAAGGUGGGCAAUGAACaauuucuauucUCCAUUGCCCACCUUGUUCACGuccuau
(((((((((((((((((((((((((...(((....)))...)))))))))))))))))))).)))))

Structure

     -                    AAC   u 
auagg cgUGAACAAGGUGGGCAAUG   aau u
||||| ||||||||||||||||||||   |||  
uaucc GCACUUGUUCCACCCGUUAC   uua c
     u                    CUc   u

Annotation confidence Not enough data

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Genome context

JQCY02003872.1: 5271-5337 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from sfr-mir-10494

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-10494-5p

Accession	MIMAT0041918
Description	Spodoptera frugiperda sfr-miR-10494-5p mature miRNA
Sequence	8 - UGAACAAGGUGGGCAAUGAAC - 28
Evidence	experimental Illumina [1]

Mature sfr-miR-10494-3p

Accession	MIMAT0041919
Description	Spodoptera frugiperda sfr-miR-10494-3p mature miRNA
Sequence	40 - UCCAUUGCCCACCUUGUUCACG - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988