Stem-loop sfr-mir-10493

Accession

MI0033618

Description

Spodoptera frugiperda sfr-mir-10493 precursor miRNA

Sequence

cagaauuuuUUCUGAUCCGAAGCUGCGGAcugccuagcgaguaaccggggcuccgguuugaaaagcaggaguagaaaCGGGGUGGUUUUUAGUCAGaaagagucug
((((.(((((((((((..((((((((..(((.(((.((....((((((....))))))......)))))))).........))))))))..)))))))))))))))

Structure

    a           CC        -------GG   g   a  --gagu      g 
caga uuuuUUCUGAU  GAAGCUGC         Acu ccu gc      aaccgg g
|||| |||||||||||  ||||||||         ||| ||| ||      ||||||  
gucu gagaaaGACUG  UUUUGGUG         uga gga cg      uuggcc c
    -           AU        GGGCaaaga   -   -  aaaagu      u 

Annotation confidence Not enough data

Genome context

JQCY02002339.1: 25755-25860 [-]

Mature sfr-miR-10493-5p

• Accession: MIMAT0041914
• Description: Spodoptera frugiperda sfr-miR-10493-5p mature miRNA
• Sequence: 10 - UUCUGAUCCGAAGCUGCGGA - 29
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10493-3p

• Accession: MIMAT0041915
• Description: Spodoptera frugiperda sfr-miR-10493-3p mature miRNA
• Sequence: 78 - CGGGGUGGUUUUUAGUCAG - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988