Stem-loop sfr-mir-10490

Accession

MI0033611

Description

Spodoptera frugiperda sfr-mir-10490 precursor miRNA

Sequence

ccgagaccuUUCCAACGAAUGCAAGACCGuggaaAUCGGUUCGUGCGUUCUGGAguuauagcguccgg
(((.((((((((((..(((((((.(((((.......)))))..))))))))))))....)).))))))

Structure

   a   -  ----     AC       -A     ug 
ccg gac cu    UUCCA  GAAUGCA  GACCG  g
||| ||| ||    |||||  |||||||  |||||  a
ggc cug ga    gAGGU  CUUGCGU  UUGGC  a
   -   c  uauu     --       GC     UA 

Annotation confidence Not enough data

Genome context

JQCY02007038.1: 8652-8719 [+]

Mature sfr-miR-10490-5p

• Accession: MIMAT0041900
• Description: Spodoptera frugiperda sfr-miR-10490-5p mature miRNA
• Sequence: 10 - UUCCAACGAAUGCAAGACCG - 29
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10490-3p

• Accession: MIMAT0041901
• Description: Spodoptera frugiperda sfr-miR-10490-3p mature miRNA
• Sequence: 35 - AUCGGUUCGUGCGUUCUGGA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988