Stem-loop sfr-mir-10489

Accession

MI0033609

Description

Spodoptera frugiperda sfr-mir-10489 precursor miRNA

Sequence

aAAUAGAUCGACUUGGACAUCgcuugauuugauuauuaguauguaucacacuacacagcacgacgggccagcgaccaacaggaacgaguuucuaauauaauauuguaauauucauuuuguuuucaugCGAUGUCCAAGUCGAUCUAUUu
(((((((((((((((((((((((.(((...........((.((((......))))..)).....((........))(((((((..((((...(((((...)))))....)))).))))))).))).)))))))))))))))))))))))

Structure

                       u   uuugauuauuaguauguaucacacuacacagcacgacgggccagcgacc       ac    -uuc     u 
aAAUAGAUCGACUUGGACAUCgc uga                                                 aacagga  gagu    uaaua  
||||||||||||||||||||||| |||                                                 |||||||  ||||    ||||| a
uUUAUCUAGCUGAACCUGUAGCg acu                                                 uuguuuu  cuua    guuau  
                       u   ------------------------------------------------u       -a    uaau     a 

Annotation confidence Not enough data

Genome context

JQCY02000745.1: 198283-198431 [-]

Mature sfr-miR-10489-5p

• Accession: MIMAT0041896
• Description: Spodoptera frugiperda sfr-miR-10489-5p mature miRNA
• Sequence: 2 - AAUAGAUCGACUUGGACAUC - 21
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10489-3p

• Accession: MIMAT0041897
• Description: Spodoptera frugiperda sfr-miR-10489-3p mature miRNA
• Sequence: 128 - CGAUGUCCAAGUCGAUCUAUU - 148
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988