miRBase entry: sfr-mir-10489

Stem-loop sfr-mir-10489


Accession
MI0033609
Description
Spodoptera frugiperda sfr-mir-10489 precursor miRNA


Sequence

aAAUAGAUCGACUUGGACAUCgcuugauuugauuauuaguauguaucacacuacacagcacgacgggccagcgaccaacaggaacgaguuucuaauauaauauuguaauauucauuuuguuuucaugCGAUGUCCAAGUCGAUCUAUUu
(((((((((((((((((((((((.(((...........((.((((......))))..)).....((........))(((((((..((((...(((((...)))))....)))).))))))).))).)))))))))))))))))))))))

Structure
                       u   uuugauuauuaguauguaucacacuacacagcacgacgggccagcgacc       ac    -uuc     u 
aAAUAGAUCGACUUGGACAUCgc uga                                                 aacagga  gagu    uaaua  
||||||||||||||||||||||| |||                                                 |||||||  ||||    ||||| a
uUUAUCUAGCUGAACCUGUAGCg acu                                                 uuguuuu  cuua    guuau  
                       u   ------------------------------------------------u       -a    uaau     a 


Annotation confidence Not enough data
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Genome context
JQCY02000745.1: 198283-198431 [-]

Database links

Mature sfr-miR-10489-5p

Accession MIMAT0041896
Description Spodoptera frugiperda sfr-miR-10489-5p mature miRNA
Sequence 2 - AAUAGAUCGACUUGGACAUC - 21
Evidence experimental
Illumina [1]

Mature sfr-miR-10489-3p

Accession MIMAT0041897
Description Spodoptera frugiperda sfr-miR-10489-3p mature miRNA
Sequence 128 - CGAUGUCCAAGUCGAUCUAUU - 148
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988