Stem-loop sfr-mir-316

Accession

MI0033606

Description

Spodoptera frugiperda sfr-mir-316 precursor miRNA

Sequence

38644 reads, 2091.0 reads per million, 42 experiments

aguucuccauaaauuUGUCUUUUUCCGCUUUGCUGCUGauaauuaugaucaugucaACAGCAAAGCGAAAAGGUCUCCUuuaugagaacu
(((((((.(((((...(.(((((((.(((((((((.(((((..........))))).)))))))))))))))).)...))))))))))))

Structure

       c     uuU U       C         C     auua 
aguucuc auaaa   G CUUUUUC GCUUUGCUG UGaua    u
||||||| |||||   | ||||||| ||||||||| |||||     
ucaagag uauuU   C GGAAAAG CGAAACGAC acugu    g
       -     CCU U       -         A     acua 

Annotation confidence High

Genome context

JQCY02000816.1: 146421-146510 [-]

Mature sfr-miR-316-5p

• Accession: MIMAT0041890
• Description: Spodoptera frugiperda sfr-miR-316-5p mature miRNA
• Sequence: 16 - UGUCUUUUUCCGCUUUGCUGCUG - 38
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-316-3p

• Accession: MIMAT0041891
• Description: Spodoptera frugiperda sfr-miR-316-3p mature miRNA
• Sequence: 57 - ACAGCAAAGCGAAAAGGUCUCCU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988