miRBase entry: sfr-mir-10487

Stem-loop sfr-mir-10487

Accession

MI0033604

Description

Spodoptera frugiperda sfr-mir-10487 precursor miRNA

Sequence

ggucuuggGCGGGGCCCAUGUUUGUCAACUcuauucuguagcgAGAUCAGACAUGGACUCCACCUcggauc
(((((.(((.((((.(((((((((((..(.((((...)))).).)).))))))))).)))).))).)))))

Structure

     u   C    C         -  AA U    u 
ggucu ggG GGGG CCAUGUUUG UC  C cuau  
||||| ||| |||| ||||||||| ||  | |||| c
cuagg UCC CCUC GGUACAGAC AG  g gaug  
     c   A    A         U  -A c    u

Annotation confidence Not enough data

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Genome context

JQCY02002420.1: 2128-2198 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-10487

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-10487-5p

Accession	MIMAT0041886
Description	Spodoptera frugiperda sfr-miR-10487-5p mature miRNA
Sequence	9 - GCGGGGCCCAUGUUUGUCAACU - 30
Evidence	experimental Illumina [1]

Mature sfr-miR-10487-3p

Accession	MIMAT0041887
Description	Spodoptera frugiperda sfr-miR-10487-3p mature miRNA
Sequence	44 - AGAUCAGACAUGGACUCCACCU - 65
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988