Stem-loop sfr-mir-10485

Accession

MI0033597

Description

Spodoptera frugiperda sfr-mir-10485 precursor miRNA

Sequence

gggggACAGUCUACCCGGACAGGCCGacuacuguaugucgCACUGGACGGGCAGGCCGCCcucc
(((((.(.((((.((((..(((..((((........))))..)))..)))).)))).)))))).

Structure

-     A A    A    GA   GC    uac 
 ggggg C GUCU CCCG  CAG  CGac   u
 ||||| | |||| ||||  |||  ||||    
 cucCC G CGGA GGGC  GUC  gcug   g
c     - C    C    AG   AC    uau 

Annotation confidence Not enough data

Genome context

JQCY02006781.1: 5985-6048 [+]

Mature sfr-miR-10485-5p

• Accession: MIMAT0041872
• Description: Spodoptera frugiperda sfr-miR-10485-5p mature miRNA
• Sequence: 6 - ACAGUCUACCCGGACAGGCCG - 26
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10485-3p

• Accession: MIMAT0041873
• Description: Spodoptera frugiperda sfr-miR-10485-3p mature miRNA
• Sequence: 41 - CACUGGACGGGCAGGCCGCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988