Stem-loop sfr-mir-10484

Accession

MI0033594

Description

Spodoptera frugiperda sfr-mir-10484 precursor miRNA

Sequence

gcagaucguauuuuagggaacagagaguaaaguucccuaagaAAAGCAGGAUCCUCCGACCagucgaggugaucguggCUGGCGGGCUUUCUGCCCUacugu
((((......(((((((((((..........)))))))))))...((((((..(.(((.(((((((.(.....).)))))))))))..))))))....))))

Structure

    aucguauuuuagggaacagagaguaaaguucccuaagaAAA      UC U   A       a g 
gcag                                         GCAGGA  C CCG CCagucg g u
||||                                         ||||||  | ||| ||||||| | g
uguc                                         CGUCUU  G GGC GGUCggu c a
    -------------------------------------aUCC      UC -   -       g u 

Annotation confidence Not enough data

Genome context

JQCY02001384.1: 11843-11944 [+]

Mature sfr-miR-10484-??

• Accession: MIMAT0041868
• Description: Spodoptera frugiperda sfr-miR-10484-?? mature miRNA
• Sequence: 43 - AAAGCAGGAUCCUCCGACC - 61
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10484-3p

• Accession: MIMAT0041869
• Description: Spodoptera frugiperda sfr-miR-10484-3p mature miRNA
• Sequence: 79 - CUGGCGGGCUUUCUGCCCU - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988