Stem-loop sfr-mir-10479

Accession

MI0033585

Description

Spodoptera frugiperda sfr-mir-10479 precursor miRNA

Sequence

ugguugguaAAUAUAAUUCAGUGACUGCUauuuucaaaagagaucugccuguuuuaauaauugugaaaugcauuagccauucuuugcauuuauaCGCGGAAAAAGCGGCUGAAUuauuaccacgcca
(((((((((...(((((((((...(((((.(((((((((.((......)).))))......(((((((((((............))))))).)))).))))).))))))))))))))))))).))))

Structure

    -     AAU         UGA     a     aaaagagaucugccuguuuuaauaau    -       uuagc 
uggu uggua   AUAAUUCAG   CUGCU uuuuc                          ugug aaaugca     c
|||| |||||   |||||||||   ||||| |||||                          |||| |||||||      
accg accau   uauUAAGUC   GGCGA AAAGG                          GCau uuuacgu     a
    c     ---         ---     A     -------------------------C    a       uucuu 

Annotation confidence Not enough data

Genome context

JQCY02007258.1: 10218-10344 [+]

Mature sfr-miR-10479-5p

• Accession: MIMAT0041851
• Description: Spodoptera frugiperda sfr-miR-10479-5p mature miRNA
• Sequence: 10 - AAUAUAAUUCAGUGACUGCU - 29
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10479-3p

• Accession: MIMAT0041852
• Description: Spodoptera frugiperda sfr-miR-10479-3p mature miRNA
• Sequence: 95 - CGCGGAAAAAGCGGCUGAAU - 114
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988