Stem-loop sfr-mir-10461b

Accession

MI0033583

Description

Spodoptera frugiperda sfr-mir-10461b precursor miRNA

Sequence

ggcuuacucacguaacuguuUGACGAGGAACUCUACUACUUccaagccaugcuaaaggcucauauucaugagcagcauuccgcgacacacgacgcggcgauugucgcuauuacugagccucuagcauggcuUGAAACUAGUCGAGUUCCUCaucaaacaguuacgugaguaagcc
(((((((((((((((((((((((.(((((((((.((((.((.((((((((((((.(((((((........(((.(((..(((((........)))))....))).))).....))))))).)))))))))))).)).)))).))))))))).)))))))))))))))))))))))

Structure

                       C         U    C  c            a       uauucaug   a   --uu     aca 
ggcuuacucacguaacuguuUGA GAGGAACUC ACUA UU caagccaugcua aggcuca        agc gca    ccgcg   c
||||||||||||||||||||||| ||||||||| |||| || |||||||||||| |||||||        ||| |||    |||||    
ccgaaugagugcauugacaaacu CUCCUUGAG UGAU AA GUucgguacgau uccgagu        ucg ugu    ggcgc   a
                       a         C    C  A            c       ---cauua   c   uagc     agc 

Annotation confidence Not enough data

Genome context

JQCY02007868.1: 7465-7639 [-]

Mature sfr-miR-10461b-5p

• Accession: MIMAT0041847
• Description: Spodoptera frugiperda sfr-miR-10461b-5p mature miRNA
• Sequence: 21 - UGACGAGGAACUCUACUACUU - 41
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10461b-3p

• Accession: MIMAT0041848
• Description: Spodoptera frugiperda sfr-miR-10461b-3p mature miRNA
• Sequence: 132 - UGAAACUAGUCGAGUUCCUC - 151
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988