Stem-loop sfr-mir-10454h

Accession

MI0033582

Description

Spodoptera frugiperda sfr-mir-10454h precursor miRNA

Sequence

uagucugcuauuacaauugUGUCAGAAUGAUCGAUCAUUGAgaagugcaagagggacggagcuauguagguuguauagcuucuucucucuugcacugcUCAAUGGUCGACUAUUCUGACacaauuuuaauaguagacua
(((((((((((((.(((((((((((((((.((((((((((((.(((((((((((((.(((((((((.......))))))))).))))))))))))).)))))))))))).))))))))))))))).)))))))))))))

Structure

             c               A            a             c         ua 
uagucugcuauua aauugUGUCAGAAUG UCGAUCAUUGAg agugcaagaggga ggagcuaug  g
||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||| |||||||||  g
aucagaugauaau uuaacaCAGUCUUAU AGCUGGUAACUc ucacguucucucu cuucgauau  u
             u               C            g             u         gu 

Annotation confidence Not enough data

Genome context

JQCY02001004.1: 102471-102609 [+]

Mature sfr-miR-10454h-5p

• Accession: MIMAT0041845
• Description: Spodoptera frugiperda sfr-miR-10454h-5p mature miRNA
• Sequence: 20 - UGUCAGAAUGAUCGAUCAUUGA - 41
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10454h-3p

• Accession: MIMAT0041846
• Description: Spodoptera frugiperda sfr-miR-10454h-3p mature miRNA
• Sequence: 99 - UCAAUGGUCGACUAUUCUGAC - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988