miRBase entry: sfr-mir-10478

Stem-loop sfr-mir-10478


Accession
MI0033581
Description
Spodoptera frugiperda sfr-mir-10478 precursor miRNA


Sequence

gcCUUAAUGGCUCUGAUACCCGuggggaggcgcuggacucguccagcaaguccCACACACGGGUCCCAAGCUGgaaggc
(((((..(((((.((..(((((((((((...((((((....))))))...))))...)))))))..))))))).)))))

Structure
     AA     C  AU       ---    ggc      c 
gcCUU  UGGCU UG  ACCCGug   ggga   gcugga u
|||||  ||||| ||  |||||||   ||||   ||||||  
cggaa  GUCGA AC  UGGGCAC   Cccu   cgaccu c
     -g     -  CC       ACA    gaa      g 


Annotation confidence Not enough data
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Genome context
JQCY02013349.1: 79-157 [-]

Database links

Mature sfr-miR-10478-5p

Accession MIMAT0041843
Description Spodoptera frugiperda sfr-miR-10478-5p mature miRNA
Sequence 3 - CUUAAUGGCUCUGAUACCCG - 22
Evidence experimental
Illumina [1]

Mature sfr-miR-10478-3p

Accession MIMAT0041844
Description Spodoptera frugiperda sfr-miR-10478-3p mature miRNA
Sequence 54 - CACACACGGGUCCCAAGCUG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988