Stem-loop sfr-mir-10478

Accession

MI0033581

Description

Spodoptera frugiperda sfr-mir-10478 precursor miRNA

Sequence

gcCUUAAUGGCUCUGAUACCCGuggggaggcgcuggacucguccagcaaguccCACACACGGGUCCCAAGCUGgaaggc
(((((..(((((.((..(((((((((((...((((((....))))))...))))...)))))))..))))))).)))))

Structure

     AA     C  AU       ---    ggc      c 
gcCUU  UGGCU UG  ACCCGug   ggga   gcugga u
|||||  ||||| ||  |||||||   ||||   ||||||  
cggaa  GUCGA AC  UGGGCAC   Cccu   cgaccu c
     -g     -  CC       ACA    gaa      g 

Annotation confidence Not enough data

Genome context

JQCY02013349.1: 79-157 [-]

Mature sfr-miR-10478-5p

• Accession: MIMAT0041843
• Description: Spodoptera frugiperda sfr-miR-10478-5p mature miRNA
• Sequence: 3 - CUUAAUGGCUCUGAUACCCG - 22
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10478-3p

• Accession: MIMAT0041844
• Description: Spodoptera frugiperda sfr-miR-10478-3p mature miRNA
• Sequence: 54 - CACACACGGGUCCCAAGCUG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988