miRBase entry: sfr-mir-10465-2

Stem-loop sfr-mir-10465-2

Accession

MI0033579

Description

Spodoptera frugiperda sfr-mir-10465-2 precursor miRNA

Sequence

GGGUGCGAGGAUACUGGCCAAUggaaaccuuaucacaCUGGCUUGUAUUCUCGCUGCCC
((((((((((((((.(((((.((((.......)).)).))))).)))))))))).))))

Structure

    -          U     A  -  aa 
GGGU GCGAGGAUAC GGCCA Ug ga  c
|||| |||||||||| ||||| || ||  c
CCCG CGCUCUUAUG UCGGU ac cu  u
    U          U     C  a  au

Annotation confidence Not enough data

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Genome context

JQCY02002420.1: 21-79 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-10465-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-10465-5p

Accession	MIMAT0041800
Description	Spodoptera frugiperda sfr-miR-10465-5p mature miRNA
Sequence	1 - GGGUGCGAGGAUACUGGCCAAU - 22
Evidence	experimental Illumina [1]

Mature sfr-miR-10465-2-3p

Accession	MIMAT0041840
Description	Spodoptera frugiperda sfr-miR-10465-2-3p mature miRNA
Sequence	38 - CUGGCUUGUAUUCUCGCUGCCC - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988