Stem-loop sfr-mir-10477

Accession

MI0033578

Description

Spodoptera frugiperda sfr-mir-10477 precursor miRNA

Sequence

ggCGACGGCGACCUCUCGCGCCcggcacugggugcaggccauggugcggagCGAGAGGGACUGGGAUGCCA
((((.(((...((((((((..(((.((((.(((....)))..))))))).))))))))..)))...)))).

Structure

-    --A   CGA        GC   g    -g   g 
 ggCG   CGG   CCUCUCGC  Ccg cacu  ggu c
 ||||   |||   ||||||||  ||| ||||  |||  
 CCGU   GUC   GGAGAGCg  ggc gugg  ccg a
A    AGG   -AG        -a   -    ua   g 

Annotation confidence Not enough data

Genome context

JQCY02000978.1: 11976-12046 [+]

Mature sfr-miR-10477-5p

• Accession: MIMAT0041838
• Description: Spodoptera frugiperda sfr-miR-10477-5p mature miRNA
• Sequence: 3 - CGACGGCGACCUCUCGCGCC - 22
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10477-3p

• Accession: MIMAT0041839
• Description: Spodoptera frugiperda sfr-miR-10477-3p mature miRNA
• Sequence: 52 - CGAGAGGGACUGGGAUGCCA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988