Stem-loop sfr-mir-10473

Accession

MI0033573

Description

Spodoptera frugiperda sfr-mir-10473 precursor miRNA

Sequence

ggcauUAGCAUCGUAGAAUUUCUGUauuucuacgaaagcugggucuuguuuuaaauuaacuuuggguuccaugauuuuaauugaaguuaGACAGAUAUUUCGCGAGCUGcggcc
(((..((((.((((.((((.((((((((((....(((((((((.((((((.......)))...))).)))).).))))....)))))...))))).)))).))))))))..)))

Structure

   au    A    A    U     ---     uacg    - -    u   ---   uu 
ggc  UAGC UCGU GAAU UCUGU   auuuc    aaag c uggg cuu   guu  a
|||  |||| |||| |||| |||||   |||||    |||| | |||| |||   |||  a
ccg  GUCG AGCG UUUA AGACA   ugaag    uuuu g accu ggg   caa  a
   gc    -    C    U     Gau     uuaa    a u    u   uuu   uu 

Annotation confidence Not enough data

Genome context

JQCY02005519.1: 1812-1925 [+]

Mature sfr-miR-10473-5p

• Accession: MIMAT0041828
• Description: Spodoptera frugiperda sfr-miR-10473-5p mature miRNA
• Sequence: 6 - UAGCAUCGUAGAAUUUCUGU - 25
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10473-3p

• Accession: MIMAT0041829
• Description: Spodoptera frugiperda sfr-miR-10473-3p mature miRNA
• Sequence: 90 - GACAGAUAUUUCGCGAGCUG - 109
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988