Stem-loop sfr-mir-10472

Accession

MI0033572

Description

Spodoptera frugiperda sfr-mir-10472 precursor miRNA

Sequence

uguaugccuUAGAAGCUGUGAUUUUUCGAUAUCuuaauucaugccauaauggacaguaauuuugaUCUUUAGUUGUCAAUUCGGCUUGUucgcauaca
(((((((...(.((((((((((........(((..((((..(((((...))).))..))))..)))........))))...)))))).)..)))))))

Structure

       cuU G      ---    UUUUCGAU   uu    ca  -   u 
uguaugc   A AAGCUG   UGAU        AUC  aauu  ug cca  
|||||||   | ||||||   ||||        |||  ||||  || ||| a
acauacg   U UUCGGC   ACUG        Uag  uuaa  ac ggu  
       -cu G      UUA    UUGAUUUC   uu    ug  a   a 

Annotation confidence Not enough data

Genome context

JQCY02008688.1: 2469-2566 [+]

Mature sfr-miR-10472-5p

• Accession: MIMAT0041826
• Description: Spodoptera frugiperda sfr-miR-10472-5p mature miRNA
• Sequence: 10 - UAGAAGCUGUGAUUUUUCGAUAUC - 33
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10472-3p

• Accession: MIMAT0041827
• Description: Spodoptera frugiperda sfr-miR-10472-3p mature miRNA
• Sequence: 66 - UCUUUAGUUGUCAAUUCGGCUUGU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988