miRBase entry: sfr-mir-277-1

Stem-loop sfr-mir-277-1

Accession

MI0033568

Description

Spodoptera frugiperda sfr-mir-277-1 precursor miRNA

Sequence

acgcuccggaguuCGUGCCAGGAGUGCGUUUGCAaagcacgcuacaaguuugcguuaaggcaaaguugacacugUAAAUGCACUAUCUGGUACGACAccccggagugu
(((((((((.((((((((((((((((((((((((..........(((.(((((......))))).)))....)))))))))))).)))))))))).)).)))))))))

Structure

         a  -          -            aagcacgcua   g     gu 
acgcuccgg gu uCGUGCCAGG AGUGCGUUUGCA          caa uuugc  u
||||||||| || |||||||||| ||||||||||||          ||| |||||   
ugugaggcc cA AGCAUGGUCU UCACGUAAAUgu          guu aaacg  a
         c  C          A            ------caca   g     ga

Annotation confidence Not enough data

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Genome context

JQCY02003144.1: 30110-30217 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-277-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-277-5p

Accession	MIMAT0041818
Description	Spodoptera frugiperda sfr-miR-277-5p mature miRNA
Sequence	14 - CGUGCCAGGAGUGCGUUUGCA - 34
Evidence	experimental Illumina [1]

Mature sfr-miR-277-3p

Accession	MIMAT0041819
Description	Spodoptera frugiperda sfr-miR-277-3p mature miRNA
Sequence	75 - UAAAUGCACUAUCUGGUACGACA - 97
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988