miRBase entry: sfr-mir-3286

Stem-loop sfr-mir-3286

Accession

MI0033567

Description

Spodoptera frugiperda sfr-mir-3286 precursor miRNA

Sequence

ugaagcccaaaacAACUAUUGGGCACUGCACAGGACuaguuacccgaauauacucUUGUGCGUGUUCUAAUAGUUGUugucggagcuuca
((((((((..((((((((((((((((.((((((((.((..(......)..)).))))))))))).)))))))))))))...)).))))))

Structure

      -  -aa             -   U        C  gu ac 
ugaagc cc   aacAACUAUUGGG CAC GCACAGGA ua  u  c
|||||| ||   ||||||||||||| ||| |||||||| ||  |   
acuucg gg   uUGUUGAUAAUCU GUG CGUGUUcu au  a  c
      a  cug             U   -        c  au ag

Annotation confidence Not enough data

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Genome context

JQCY02000420.1: 68751-68840 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-3286

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-3286-5p

Accession	MIMAT0041816
Description	Spodoptera frugiperda sfr-miR-3286-5p mature miRNA
Sequence	14 - AACUAUUGGGCACUGCACAGGAC - 36
Evidence	experimental Illumina [1]

Mature sfr-miR-3286-3p

Accession	MIMAT0041817
Description	Spodoptera frugiperda sfr-miR-3286-3p mature miRNA
Sequence	56 - UUGUGCGUGUUCUAAUAGUUGU - 77
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988