Stem-loop sfr-mir-10454f

Accession

MI0033565

Description

Spodoptera frugiperda sfr-mir-10454f precursor miRNA

Sequence

ggggacuuagucugCUAUUACAAUUGUGUCAGAUuggucgaucacugaucagugcgagagggacggagcuauguagguuguauagcuccguuccucucgcacugaucagugaucgaucAUUCUGACACAAUUGUAAUAgcagacuaaggcccc
((((.((((((((((((((((((((((((((((.(((((((((((((((((((((((((((((((((((((((.......))))))))))))))))))))))))))))))))))))))).)))))))))))))))))))))))))))).))))

Structure

    a                            U                                       ua 
gggg cuuagucugCUAUUACAAUUGUGUCAGA uggucgaucacugaucagugcgagagggacggagcuaug  g
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  g
cccc gaaucagacgAUAAUGUUAACACAGUCU Acuagcuagugacuagucacgcucuccuugccucgauau  u
    g                            U                                       gu 

Annotation confidence Not enough data

Genome context

JQCY02007323.1: 1121-1273 [+]

Mature sfr-miR-10454f-5p

• Accession: MIMAT0041812
• Description: Spodoptera frugiperda sfr-miR-10454f-5p mature miRNA
• Sequence: 15 - CUAUUACAAUUGUGUCAGAU - 34
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10454f-3p

• Accession: MIMAT0041813
• Description: Spodoptera frugiperda sfr-miR-10454f-3p mature miRNA
• Sequence: 119 - AUUCUGACACAAUUGUAAUA - 138
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988