miRBase entry: sfr-mir-10454f

Stem-loop sfr-mir-10454f


Accession
MI0033565
Description
Spodoptera frugiperda sfr-mir-10454f precursor miRNA


Sequence

ggggacuuagucugCUAUUACAAUUGUGUCAGAUuggucgaucacugaucagugcgagagggacggagcuauguagguuguauagcuccguuccucucgcacugaucagugaucgaucAUUCUGACACAAUUGUAAUAgcagacuaaggcccc
((((.((((((((((((((((((((((((((((.(((((((((((((((((((((((((((((((((((((((.......))))))))))))))))))))))))))))))))))))))).)))))))))))))))))))))))))))).))))

Structure
    a                            U                                       ua 
gggg cuuagucugCUAUUACAAUUGUGUCAGA uggucgaucacugaucagugcgagagggacggagcuaug  g
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  g
cccc gaaucagacgAUAAUGUUAACACAGUCU Acuagcuagugacuagucacgcucuccuugccucgauau  u
    g                            U                                       gu 


Annotation confidence Not enough data
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Genome context
JQCY02007323.1: 1121-1273 [+]

Database links

Mature sfr-miR-10454f-5p

Accession MIMAT0041812
Description Spodoptera frugiperda sfr-miR-10454f-5p mature miRNA
Sequence 15 - CUAUUACAAUUGUGUCAGAU - 34
Evidence experimental
Illumina [1]

Mature sfr-miR-10454f-3p

Accession MIMAT0041813
Description Spodoptera frugiperda sfr-miR-10454f-3p mature miRNA
Sequence 119 - AUUCUGACACAAUUGUAAUA - 138
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988