miRBase entry: sfr-mir-10466

Stem-loop sfr-mir-10466

Accession

MI0033560

Description

Spodoptera frugiperda sfr-mir-10466 precursor miRNA

Sequence

UAUAAUUAUCAGCACCGUCCAaaugucaaacacugauacuuuUGAGAGGUGCAGGUAAUUAUA
((((((((((.(((((.(((((((((((.....)))))..)))).))))))).))))))))))

Structure

          A     G  -    --     a 
UAUAAUUAUC GCACC UC CAaa  uguca a
|||||||||| ||||| || ||||  ||||| c
AUAUUAAUGG CGUGG AG GUuu  auagu a
          A     -  A    uc     c

Annotation confidence Not enough data

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Genome context

JQCY02003144.1: 10758-10820 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-10466

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-10466-5p

Accession	MIMAT0041802
Description	Spodoptera frugiperda sfr-miR-10466-5p mature miRNA
Sequence	1 - UAUAAUUAUCAGCACCGUCCA - 21
Evidence	experimental Illumina [1]

Mature sfr-miR-10466-3p

Accession	MIMAT0041803
Description	Spodoptera frugiperda sfr-miR-10466-3p mature miRNA
Sequence	43 - UGAGAGGUGCAGGUAAUUAUA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988