Stem-loop sfr-mir-10465-1

Accession

MI0033559

Description

Spodoptera frugiperda sfr-mir-10465-1 precursor miRNA

Sequence

ggugaaagugccGGGUGCGAGGAUACUGGCCAAUggaaaccuuaucacaCUGACUUGUAUUCUCGCUGCCCagcaauuuugcc
(((((((.(((.((((((((((((((.((.((.((((.......)).)).)).)).)))))))))).)))).))).)))))))

Structure

       g   c    -          U  C  A  -  aa 
ggugaaa ugc GGGU GCGAGGAUAC GG CA Ug ga  c
||||||| ||| |||| |||||||||| || || || ||  c
ccguuuu acg CCCG CGCUCUUAUG UC GU ac cu  u
       a   a    U          U  A  C  a  au 

Annotation confidence Not enough data

Genome context

JQCY02033747.1: 112-194 [-]

Mature sfr-miR-10465-5p

• Accession: MIMAT0041800
• Description: Spodoptera frugiperda sfr-miR-10465-5p mature miRNA
• Sequence: 13 - GGGUGCGAGGAUACUGGCCAAU - 34
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10465-3p

• Accession: MIMAT0041801
• Description: Spodoptera frugiperda sfr-miR-10465-3p mature miRNA
• Sequence: 50 - CUGACUUGUAUUCUCGCUGCCC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988