Stem-loop sfr-mir-10464

Accession

MI0033558

Description

Spodoptera frugiperda sfr-mir-10464 precursor miRNA

Sequence

gACACGACUGCAAUAGAACUGcaaaucaaacgugcgguccgauuguaguugaauugcagucggugugcaguucacauaaugcuaggcugcacgguuggcuugCAGUACCAUUGCAGUCGUGUC
((((((((((((((.(.(((((((.(((..(((((((((..(((((.((.((((((((.......)))))))))))))))....)))))))))..))).))))))).).))))))))))))))

Structure

              A A       a   aa         --cg     a  u        gu 
gACACGACUGCAAU G ACUGcaa uca  cgugcgguc    auugu gu gaauugca  c
|||||||||||||| | ||||||| |||  |||||||||    ||||| || ||||||||  g
CUGUGCUGACGUUA C UGACguu ggu  gcacgucgg    uaaua ca cuugacgu  g
              C A       c   ug         aucg     -  -        gu 

Annotation confidence Not enough data

Genome context

JQCY02009733.1: 14542-14664 [+]

Mature sfr-miR-10464-5p

• Accession: MIMAT0041798
• Description: Spodoptera frugiperda sfr-miR-10464-5p mature miRNA
• Sequence: 2 - ACACGACUGCAAUAGAACUG - 21
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10464-3p

• Accession: MIMAT0041799
• Description: Spodoptera frugiperda sfr-miR-10464-3p mature miRNA
• Sequence: 103 - CAGUACCAUUGCAGUCGUGUC - 123
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988