miRBase entry: sfr-mir-10462-2

Stem-loop sfr-mir-10462-2

Accession

MI0033556

Description

Spodoptera frugiperda sfr-mir-10462-2 precursor miRNA

Sequence

cccuaaaacaagaauauaaGAAUUUAAGCAGUCGGGACCcauucuaaauauuaugaauuaugacuuucuagaAUGGGUCCCGACUGCUUAAAUucuuauauucuuguuuuaggg
((((((((((((((((((((((((((((((((((((((((((((((((..(((((...)))))..)).))))))))))))))))))))))))))))))))))))))))))))))

Structure

                                              -  ua     a 
cccuaaaacaagaauauaaGAAUUUAAGCAGUCGGGACCcauucua aa  uuaug  
|||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| a
gggauuuuguucuuauauucuUAAAUUCGUCAGCCCUGGGUAagau uu  aguau  
                                              c  uc     u

Annotation confidence Not enough data

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Genome context

JQCY02004987.1: 2335-2448 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-10462-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-10462-5p

Accession	MIMAT0041794
Description	Spodoptera frugiperda sfr-miR-10462-5p mature miRNA
Sequence	20 - GAAUUUAAGCAGUCGGGACC - 39
Evidence	experimental Illumina [1]

Mature sfr-miR-10462-3p

Accession	MIMAT0041795
Description	Spodoptera frugiperda sfr-miR-10462-3p mature miRNA
Sequence	73 - AUGGGUCCCGACUGCUUAAAU - 93
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988