Stem-loop sfr-mir-10462-1

Accession

MI0033555

Description

Spodoptera frugiperda sfr-mir-10462-1 precursor miRNA

Sequence

acccuaaaacaagaauauaaGAAUUUAAGCAGUCGGGACCcauucuagaaagucauaauucauaauauuuagaAUGGGUCCCGACUGCUUAAAUucuuauauucuuguuuuagggu
(((((((((((((((((((((((((((((((((((((((((((((((((..................)))))))))))))))))))))))))))))))))))))))))))))))))

Structure

                                                 aagucaua 
acccuaaaacaagaauauaaGAAUUUAAGCAGUCGGGACCcauucuaga        a
|||||||||||||||||||||||||||||||||||||||||||||||||         
ugggauuuuguucuuauauucuUAAAUUCGUCAGCCCUGGGUAagauuu        u
                                                 auaauacu 

Annotation confidence Not enough data

Genome context

JQCY02004987.1: 2334-2449 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-10462-1

Mature sfr-miR-10462-5p

• Accession: MIMAT0041794
• Description: Spodoptera frugiperda sfr-miR-10462-5p mature miRNA
• Sequence: 21 - GAAUUUAAGCAGUCGGGACC - 40
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10462-3p

• Accession: MIMAT0041795
• Description: Spodoptera frugiperda sfr-miR-10462-3p mature miRNA
• Sequence: 74 - AUGGGUCCCGACUGCUUAAAU - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988