We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
Want the script? Email us or visit Downloads or something.
u - G aa cucauu - ca
uugaCGAGGA CU GACUAGUGUCAagu ugcuagagggucgug aguagcauucc c a
|||||||||| || |||||||||||||| ||||||||||||||| ||||||||||| |
aaCUGCUCUU GA CUGAUCAcaguuca augaucuccuaguau ucgucguaagg g c
a U G ga aaauau u ca